BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011G05SP1|AL426263
(763 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1653 1465 0.0
>3x_Contig1653
Length = 14012
Score = 1465 bits (735), Expect = 0.0
Identities = 751/759 (98%)
Strand = Plus / Plus
Query: 5 cattgcaaatttacaatagtctttmaaaatttccaatctttccttagaacttttatccat 64
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 7656 cattgcaaatttacaatagtctttcaaaatttccaatctttccttagaacttttatccat 7715
Query: 65 gtattgctgggcatcgacttcttcgaagatccatggcttaattagtgcaccacgagaaac 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 7716 gtattgctgggcatcgacttcttcgaagatccatggcttaattagtgcaccacgagcaac 7775
Query: 125 catcaaactatcmatgtttttattttcaagatgtttgtaccaatcttcccagttgttaca 184
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7776 catcacactatccatgtttttattttcaagatgtttgtaccaatcttcccagttgttaca 7835
Query: 185 atcaccgttaccaacaaattgaatcttctggccatctcttagattcttgttctcttgtct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7836 atcaccgttaccaacaaattgaatcttctggccatctcttagattcttgttctcttgtct 7895
Query: 245 ttctgcttcgtatgtkcttaccgcattagctacctctccgacatagtcccaatcggcaga 304
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7896 ttctgcttcgtatgtccttaccgcattagctacctctccgacatagtcccaatcggcaga 7955
Query: 305 tttagtgtatctttgttgtstggttctaccatgcaaagtgatagctgcaacgtccgtttc 364
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 7956 tttagtgtatctttgttgtctggttctaccatgcaaagtgatagctgcaacgtccgtttc 8015
Query: 365 aagcactaatctcttagtgatagataatgcaattggatggccttctctagtaccagtacg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8016 aagcactaatctcttagtgatagataatgcaattggatggccttctctagtaccagtacg 8075
Query: 425 gatyttcacggtgacaggtatgtkgttcgaaacatagttcataccattcaaacaacggat 484
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 8076 gatcttcacggtgacaggtatgtcgttcgaaacatagttcataccattcaaacaacggat 8135
Query: 485 cattctggcaggattatctagtaatgcgcttccgctaccttgtctgtataaaagatcaat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8136 cattctggcaggattatctagtaatgcgcttccgctaccttgtctgtataaaagatcaat 8195
Query: 545 cgggcaaccactgtttagatttatttcgctaactccagtgacgttagcagcaagtgcttc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8196 cgggcaaccactgtttagatttatttcgctaactccagtgacgttagcagcaagtgcttc 8255
Query: 605 tgcagcctttgcagcttgccaagtttttgaacatgcaatttgaacaccaaacccaggaaa 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8256 tgcagcctttgcagcttgccaagtttttgaacatgcaatttgaacaccaaacccaggaaa 8315
Query: 665 ctctgagcaatgggccttcggtagtgcccattctgaatttgtaccttgaatcaagggaac 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8316 ctctgagcaatgggccttcggtagtgcccattctgaatttgtaccttgaatcaagggaac 8375
Query: 725 agccaaagccatttcagaataagtcacgtctgctcctaa 763
|||||||||||||||||||||||||||||||||||||||
Sbjct: 8376 agccaaagccatttcagaataagtcacgtctgctcctaa 8414
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4956
Number of Sequences: 1807
Number of extensions: 4956
Number of successful extensions: 105
Number of sequences better than 1.0e-20: 1
length of query: 763
length of database: 10,358,551
effective HSP length: 16
effective length of query: 747
effective length of database: 10,329,639
effective search space: 7716240333
effective search space used: 7716240333
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)